
Biodesign and Systems Biology
Advancing biodesign for biotechnology innovation, energy, and environmental solutions
Scientists working in the Biodesign and Systems Biology section at Oak Ridge National Laboratory aim to uncover the fundamental mechanisms that shape biological responses—and use this knowledge to design solutions that enhance plant performance, optimize microbial interactions, and improve bioengineering processes.
The team characterizes the intricate network of genes, proteins, metabolites, and environmental signals that lead to improved plant traits and performance. By studying how these components interact, scientists develop strategies to enhance crop resilience, productivity, and adaptability with the aim of strengthening domestic energy security.
Researchers integrate cellular, molecular, and genomic approaches to study microbial communities and their interactions with hosts and the surrounding environment. Understanding these complex relationships allows the team to harness microbes for beneficial applications, such as improving soil health, advancing biofuel production, and addressing environmental contaminants.
Another major emphasis of the research is on biosystems design, where researchers develop and apply innovative principles to engineer biological systems with precision in non-model organisms, biofuels crops and associated biosystems. By employing both rational and automated design strategies, the team is creating new tools and methodologies to accelerate biotechnology advancements to solve pressing energy and environmental challenges.
We’re working from the organism to the ecosystem level to pioneer approaches that not only deepen our understanding of biological complexity but also translate scientific discoveries into real-world applications that benefit energy production, the environment, and the bioeconomy.

Integrative Microbiomics
Investigating molecular mechanisms at genomic and biochemical levels to understand how microbial communities and individual species adapt to and interact with each other and with the environment

Plant Systems Biology
Exploring the network of genes, proteins, metabolites, and environmental signals that lead to improved plant characteristics and performance, focusing on the underlying molecular genetics, physiological processes, and mechanisms influencing plant-microbe interactions and bioenergy feedstock productivity

Synthetic Biology
Identifying the function of key genes and leveraging that knowledge to engineer plants, bacteria, and fungi for applications such as biochemical conversion of plants into fuels, upcycling of plastics into higher-value chemicals, breaking down toxins in the environment, and creating hardier, more disease- and drought-resistant plants