December 2012

Conference Paper

Statistical Inference for Big Data Problems in Molecular Biophysics

By:
Ramanathan, Arvind ; Savol, Andrej; Burger, Virginia; Quinn, Shannon; Agarwal, Pratul K; Chennubhotla, Chakra
Publication Date:
December 2012
Conference Name:
Neural Information Processing Systems: Workshop on Big Learning
Conference Location:
South Lake Tahoe, California, United States of America

Abstract

We highlight the role of statistical inference techniques in providing biological insights from analyzing long time-scale molecular simulation data. Technologi- cal and algorithmic improvements in computation have brought molecular simu- lations to the forefront of techniques applied to investigating the basis of living systems. While these longer simulations, increasingly complex reaching petabyte scales presently, promise a detailed view into microscopic behavior, teasing out the important information has now become a true challenge on its own. Mining this data for important patterns is critical to automating therapeutic intervention discovery, improving protein design, and fundamentally understanding the mech- anistic basis of cellular homeostasis.