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Data transfer between scientific facilities – bottleneck analysis, insights, and optimizations

Publication Type
Conference Paper
Book Title
2019 19th IEEE/ACM International Symposium on Cluster, Cloud and Grid Computing (CCGRID)
Publication Date
Page Numbers
122 to 131
Publisher Location
United States of America
Conference Name
19th IEEE/ACM International Symposium on Cluster, Cloud and Grid Computing (CCGRID 2019)
Conference Location
Larnaca, Cyprus
Conference Sponsor
IEEE/ACM
Conference Date
-

Wide area file transfers play an important role in many science applications. File transfer tools typically deliver the highest performance for datasets with a small number of large files, but many science datasets consist of many small files. Thus it is important to understand the factors that contribute to the decrease in wide area data transfer performance for datasets with many small files. To this end, we (i) benchmark the performance of subsystems involved in end-to-end file transfer between two HPC facilities for a many-file dataset that is representative of production science transfers; (ii) characterize the per-file overhead introduced by different subsystems; (iii) identify potential dependencies and bottlenecks; (iv) study the effectiveness of transferring many files concurrently as a means of reducing per-file overheads; and (v) prototype a prefetching mechanism as an alternative of concurrency to reduce the per-file overhead on source storage system. We show that both concurrency and prefetching can help reduce the per-file overhead significantly. A reasonable level of concurrency combined with prefetching can bring the per-file overhead down to a negligible level.