Biosciences Division

2002 Presentations

Armstrong, A. Q., "GIS applications in Environmental Health," presented to U.S. Public Health Officers from the Division of Environmental Health, Indian Health Service, Department of Health and Human Services, Oak Ridge National Laboratory, Oak Ridge, Tennessee, March 12-13, 2002.

Armstrong, A. Q., B. L. Bhaduri, and W. W. Hargrove, "Spatio-Temporal Analysis of Disease and Environmental Data Using Statistical Tools Integrated with GIS," presented at Healthy People, Healthy Ecosystems Conference, International Society of Environmental Health, Washington, D.C., June 6-11, 2002.

Baker, E. J., D. Hyatt, B. Jackson, G.-L. Chen, D. D. Schmoyer, Y. Aydin-Son, D. McWilliams, C. F. Baes, S. Kirov, M. D. Galloway, M. Leuze, L. Pouchard, B. H. Jones, E. J. Michaud, C. T. Culiat, E. M. Rinchik, D. K. Johnson, E. C. Uberbacher, D. R. Miller, F. W. Larimer, and J. R. Snoddy, "Comparative and Collaborative Bioinformatics Systems to Promote Mammalian Phenotype Analysis and the Elucidation of Regulatory Networks," presented at the Ninth DOE Contractor and Grantee Workshop, Oakland, California, January 27-31, 2002.

Baker, E. J., B. H. Jones, D. Hyatt, M. Shah, C. T. Culiat, M. J. Doktycz, P. R. Hoyt, D. Schmoyer, M. Leuze, L. Pouchard, F. W. Larimer, E. M. Rinchik, E. J. Michaud, and J. Snoddy, "Integrating Computational Analysis of Orthologous Gene Sequences and RNA Expressions Analysis in the Mouse Skin," presented at the Genome Sequencing and Biology Meeting, May 2002.

Baker, E. J., D. Hyatt, B. Jackson, G.-L. Chen, D. Schmoyer, Y. Aydin-Son, D. McWilliams, C. F. Baes, S. Kirov, M. Galloway, M. Leuze, L. Pouchard, P. F. LoCascio, B. H. Jones, F. W. Larimer, and J. Snoddy, "Comparative and Collaborative Bioinformatics Required to Study the Gene Regulatory Networks that Create Phenotypes," presented at the Genome Sequencing and Biology Meeting, May 2002.

Barton, J. W., S. A. Jones, C. D. Vodraska, and B. H. Davison, "Enhanced Solubility of BTEX and Chloroorganics in High-Biomass Systems and Associated Impacts on Biofilter Operation," presented at 2002 USC-TRG Conference on Biofiltration, Newport Beach, California, October 30-November 1, 2002 (published in proceedings).

Bogard, J. S., "Touch of Grey: A 20-Year Retrospective on Radiation Dosimetry," Keynote Address presented at the Harshaw TLD Users' Group Symposium, St. Anthony Hotel, San Antonio, Texas, May 19-23, 2002.

Bogard, J. S., "Neutron Detection & Characterization for Non-Proliferation Applications Using 3D Computer Optical Memories," presented at the Nuclear Arms Reduction and Enabling Technology Program Review (DOE/NA-22, David Spears, Program Manger), Hanford, Washington, July 16, 2002.

Borges, H. T., "Cancer and AIDS Databases," presented to U.S. Public Health Officers from the Division of Environmental Health, Indian Health Service, Department of Health and Human Services, Oak Ridge National Laboratory, Oak Ridge, Tennessee, March 12-13, 2002.

Borole, A. P. and C. Y. Hamilton, "Enzyme Specificity during C-S Bond Cleavage in Biodesulfurization of Petroleum Feedtocks," presented at the 24th Symposium on Biotechnology for Fuels and Chemicals, Gatlinburg, Tennessee, April 28-May 1, 2002 (poster session).

Brothers, R. A., "History of ORNL/HIS Interactions and Future Prospects," presented to U.S. Public Health Officers from the Division of Environmental Health, Indian Health Service, Department of Health and Human Services, Oak Ridge National Laboratory, Oak Ridge, Tennessee, March 12-13, 2002.

Chen, C.-H., S. L. Allman, K. J. Matteson, and L. Sammartano, "Laser Desorption Mass Spectrometry for DNA Sequencing and Hybridization Detection," presented at the Ninth DOE Contractor and Grantee Workshop, Oakland, California, January 27-31, 2002.

Culiat, C. T., "Nell1: A Candidate Gene for ENU-Induced Recessive Lethal Mutations at the I7R6 Locus and Potential Mouse Models for Human Neonatal Unilateral Coronal Synostosis (UCS)," presented at the Ninth DOE Contractor and Grantee Workshop, Oakland, California, January 27-31, 2002 poster session)

Culiat, C. T., "Mutation Scanning and Candidate Gene Verification in the ORNL Regional ENU-Mutagenesis Program," presented to Virginia Polytechnic Institute and State University Faculty, Oak Ridge National Laboratory, Oak Ridge, Tennessee, February 15, 2002.

Culiat, C. T., "Functional Annotation of the Human Genome Using the ORNL Mutant and Inbred Mouse Strain Resource," presented at the UT/ORNL Genome Science and Technology Colliquium, Knoxville, Tennessee, February 21, 2002.

Culiat, C. T., "Functional Annotation of Human Genome Sequence Using Mutant Mouse Models," presented at Duke University Medical Center, Durham, North Carolina, May 1, 2002 (Invited).

Culiat, C. T., "Nell1, A Gene Coding for a Novel Protein Kinase C-binding Protein is a Candidate for Late Gestation Recessive Lethal Mutations at the I7R6 Locus," presented at the Southeast Regional Meeting of the Society for Developmental Biology, Gatlinburg, Tennessee, May 29-31, 2002 (poster session).

Culiat, C. T., Q. Li, M. L. Klebig, D. K. Johnson, Z. Liu, H. Monroe, B. Stanford, T. Lu, L. Hughes, M. Kerley, D. Carpenter, L. Webb, and E. M. Rinchik, "Mutation Scanning and Candidate-Gene Verification in the ORNL Regional ENU-Mutagenesis Program," presented at the UT/ORNL Graduate School of Genome Science and Technology Retreat, Knoxville, Tennessee, May 1, 2002 (poster session).

Culiat, C. T., "High-throughput Identification of Point Mutations in the Mouse Genome Using Temperature Gradient Capillary Electrophoresis (TGCE)," presented at the DOE Office of Science On-Site Review of the ORNL Institutional Plan, Oak Ridge National Laboratory, Oak Ridge, Tennessee, August 9, 2002 (Invited).

Dale, V., S. Bartell, J. Sorensen, and R. A. Brothers, "A Systems Approach to Ecosystem Health," presented at Healthy People, Healthy Ecosystems Conference, International Society of Environmental Health, Washington, D.C., June 6-11, 2002.

Doktycz, M. J., "Applications of Picoliter and Nanoliter Fluid handling and Arraying," presented at SPIE, Photonics West Conference, San Jose, California, January 2002.

Doktycz, M. J., L. Zhang, A. Meleshko, V. Merkulov, M. Guillorn, D. H. Lowndes, and M. Simpson, "Nanoengineered Membranes for Controlled Transport," presented at the Joint DARPA BioFlips/Simbiosys PI Meeting, Miami Beach, Florida, February 20-22, 2002.

Doktycz, M. J., "Microarrays and Related Technologies," presented to the Triangle Array Users Group, North Carolina Biotechnology Center, Raleigh-Durham, North Carolina, April 4, 2002.

Doktycz, M. J., "Analytical Technology Developments for Genomics," presented at Pacific Northwest National Laboratory, May 15, 2002 (Invited).

Doktycz, M. J., L. Zhang, L. M. Penn, P. F. Brigg, M. A. Guillorn, A. V. Melechko, V. I. Merkulov, T. E. McKnight, D. H. Lowndes, and M. L. Simpson, "Nanofiber Structures for Molecular Assembly and Controlled Transport," presented at the Scanning Probe Microscopy Sensors and Nanostructures Conference, Las Vegas, Nevada, May 28, 2002.

Doktycz, M. J., L. Zhang, L. M. Penn, P. F. Britt, M. A. Guillorn, A. V. Melechko, V. I. Merkulov, T. E. McKnight, D. H. Lowndes, and M. L. Simpson, "Nanofiber Structures as Mimics for Cellular Structures," presented at the JPL In Situ Instruments Workshop, Pasadena, California, June 2002.

Doktycz, M. J., "Macro-, micro- and nano-technologies for genomics," presented to the Department of Chemistry and Biochemistry, University of Mississippi, Oxford, Mississippi, September 2002 (Invited).

Forsyth, C. S. and P. H. Reno, "Tar Creek: A Proposal to NIEHS to Assess Heavy Metal Toxicity to Native Americans via Culture-Specific Routes," presented to U.S. Public Health Officers from the Division of Environmental Health, Indian Health Service, Department of Health and Human Services, Oak Ridge National Laboratory, Oak Ridge, Tennessee, March 12-13, 2002.

Galloway, L. B. and C. F. Baes, "User Interfaces for Environmental Databases," presented to U.S. Public Health Officers from the Division of Environmental Health, Indian Health Service, Department of Health and Human Services, Oak Ridge National Laboratory, Oak Ridge, Tennessee, March 12-13, 2002.

Hingerty, B., M. Cosman, D. J. Patel, and S. Broyde, "Molecular Views of Carcinogen Damaged DNA," presented at the 7th World Congress on Advances in Oncology and the 5th International Symposium on Molecular Medicine, Hersonissos, Crete, Greece, October 10-12, 2002. (Invited; Session co-chair of the Epidemiology and Carcinogenesis session)

Hu, Z., T. Seeley, S. Kossek, and T. G. Thundat, "Reliable Method for Calibration of Optical Cantilever Deflection Detection Systems," presented at the Scanning Probe Microscopy Sensors and Nanostructures Conference, Las Vegas, Nevada, May 28, 2002.

Hurst, G. B., R. L. Hettich, J. L. Stephenson, P. F. Britt, M. Sega, J. Lewis, P. K. Lankford, M. V. Buchanan, E. C. Uberbacher, Y. Xu, D. Xu, J. Razumovskaya, and V. N. Olman, "Investigating Protein Complexes by Crosslinking and Mass Spectrometry," presented at the Ninth DOE Contractor and Grantee Workshop, Oakland, California, January 27-31, 2002.

Hyatt, D., F. W. Larimer, P. F. LoCascio, V. N. Olman, M. B. Shah, Y. Xu, and E. C. Uberbacher, "GrailEXP": Gene Recognition Using Neural Networks and Similarity Search," presented at the Ninth DOE Contractor and Grantee Workshop, Oakland, California, January 27-31, 2002.

Johnson, D. K. and K. Goss, "Behavior Core," presented at the Tennessee Mouse Genome Consortium Retreat, Knoxville, Tennessee, December 5-6, 2001.

Johnson, D. K., "Mammalian and Genetics Research at ORNL," presented to Carl Kohrt, CEO Battelle, Oak Ridge National Laboratory, Oak Ridge, Tennessee, January 3, 2002.

Johnson, D. K., E. M. Rinchik, P. R. Hunsicker, S. G. Shinpock, K. J. House, D. J. Carpenter, G. D. Shaw, W. Packan, E. J. Michaud, B. L. Alspaugh, and L. B. Russell, "Resource Archiving and Distribution via the Mutant Mouse Database and the Cryopreservation Program at Oak Ridge National Laboratory," presented at the Ninth DOE Contractor and Grantee Workshop, Oakland, California, January 27-31, 2002.

Johnson, D. K., "ORNL's Mouse-Genetics Core Program," presented to Virginia Polytechnic Institute and State University Faculty, Oak Ridge National Laboratory, Oak Ridge, Tennessee, February 15, 2002.

Johnson, D. K., "Using Mice to Study How Genes Work," presented to the UT Golden Grads at D. J. Nelson Auditorium, Oak Ridge National Laboratory, Oak Ridge, Tennessee, May 10, 2002 (Invited).

Johnson, D. K., "The Role of the Mouse as a Model for Studing Human Gene Function," presented to the East Tennessee Regional Leadership Association Class of 2002, Oak Ridge National Laboratory, Oak Ridge, Tennessee, July 24, 2002 (Invited).

Johnson, D. K., "Using Mice to Study How Genes Work," presented at a seminar for summer students, Oak Ridge National Laboratory, Oak Ridge, Tennessee, July 31, 2002 (Invited).

Johnson, D. K., "Resource Archiving and Distribution via the Mutant Mouse Database and the Cryopreservation Program at the Oak Ridge National Laboratory," poster presented at the Complex Biology Initiative Review, Oak Ridge, Tennessee, August 1, 2002.

Johnson, D. K., "The Role of ORNL's Mouse Genetics Program in Complex Biology for the Future," presented at the DOE Office of Science On-Site Review of the ORNL Institutional Plan, Oak Ridge National Laboratory, Oak Ridge, Tennessee, August 9, 2002 (Invited).

Johnson, D. K., "Using mice to determine the functions of human genes," presented to the Tennessee Valley Chapter of the American Vacuum Society held at Rothchild's, Knoxville, Tennessee, October 8, 2002. (Invited)

Johnson, D. K. "The Role of Mouse Genetics and Genomics Program in ORNL's Complex Biological Systems Initiative," presented at Pacific Northwest National Laboratory, Fundamental Science Directorate, EMSL Auditorium, Richland, Washington, September 16, 2002. (Invited)

Johnson, D. K., "Mice can help!" presented to students of the Biology Club at Webb School, Knoxville, Tennessee, October 17, 2002. (Invited)

Johnson, D. K., "Using Mice to Determine What Genes Do,"presented to the Fall semester students, Oak Ridge National Laboratory, Oak Ridge, Tennessee, October 30, 2002. (Invited)

Johnson, D. K., "The role of mice in biological research," presented to Leadership Team Spouses, Oak Ridge National Laboratory, Oak Ridge, Tennessee, November 11, 2002 (invited). 

Jones, B. H., "Microarray Analysis of Gene Networks," presented to Virginia Polytechnic Institute and State University Faculty, Oak Ridge National Laboratory, Oak Ridge, Tennessee, February 15, 2002.

Jones, B. H., "Hairy Issues: Using Mouse Models of Skin and Hair Pathology to Understand Gene Regulatory Networks in Complex Organisms," presented at the Center for Bioinformatics and Computational Biology, Duke University, Durham, North Carolina, April 3, 2002 (Invited).

Jones, B. H., J. R. Snoddy, E. J. Baker, D. P. Hyatt, D. D. Schmoyer, L. C. Pouchard, and M. R. Leuze, "Elucidating Eukaryotic Gene Regulatory Networks," presented at the UT/ORNL Graduate School of Genome Science and Technology Retreat, Knoxville, Tennessee, March 1, 2002 (poster session).

Jones, B. H., J. R. Snoddy, E. J. Baker, D. P. Hyatt, D. D. Schmoyer, L. C. Pouchard, and M. R. Leuze, "Elucidating Eukaryotic Gene Regulatory Networks," presented at the Ninth DOE Contractor and Grantee Workshop, Oakland, California, January 27-31, 2002 (Invited Poster).

Jones, B. H., "Elucidating gene regulatory networks involved in hair and skin physiology by integrating experimental and computational approaches," presented at the International Mouse Genome Society Meeting, San Antonio, Texas, November 17-21, 2002.

Klasson, T. K. and N. P. Nghiem, "Energy Production from Zoo Animal Wastes," presented at the 24th Symposium on Biotechnology for Fuels and Chemicals, Gatlinburg, Tennessee, April 28-May 1, 2002 (poster session).

Klasson, K. T. and B. H. Davison, "A General Methodology for Evaluation of Carbon Dioxide Sequestration Activities," presented at the Nineteenth Annual International Pittsburgh Coal Conference," Pittsburgh, Pennsylvania, September 23-27, 2002 (published in proceedings).

Klebig, M. L., E. Johnson, M. Hill, M. Kerley, L. Rainwater, and E. M. Rinchik, "Mice Hemizygous for ENU-Induced Mutations at the fit1 Locus have DNA Sequence and Structural Alterations in Calm, a Gene for a Clathrin-Assembly Protein," presented at the UT/ORNL Graduate School of Genome Science and Technology Retreat, Knoxville, Tennessee, March 1, 2002 (poster session).

Klebig, M., E. Johnson, M. Hill, M. Kerley, L. Rainwater, and E. M. Rinchik, "Mise Hemizygous for ENU-Induced Mutations at the fit1 Locus have DNA Sequence and Structural Alternations in Calm, a Gene for a Clathrin-Assembly Protein," DOE Review of the ORNL Complex Systems Biology Program, Oak Ridge, Tennessee, August 1, 2002 (poster).

Kulkarni, S. R. and A. B. Pandit, "Modification of Lipase for the Hydrolysis of Castor Oil," presented at the 24th Symposium on Biotechnology for Fuels and Chemicals, Gatlinburg, Tennessee, April 29, 2002 (poster session and oral presentation).

Land, M. L., F. W. Larimer, J. R. Snoddy, D. D. Schmoyer, D. Hyatt, M. B. Shah, I. Vokler, P. F. LoCascio, G.-L. Chen, L. Hauser, and E. C. Uberbacher, "The Genome Channel: A Foundation for Genomes to Life and Comparative Genomics," presented at the Ninth DOE Contractor and Grantee Workshop, Oakland, California, January 27-31, 2002.

Land, M. L., F. W. Larimer, L. Hauser, D. D. Schmoyer, G.-L. Chen, D. Hyatt, M. Shah, I. Vokler, P. F. LoCascio, J. R. Snoddy, and E. C. Uberbacher, "The Genome Channel: Annotation and Display from Multiple Gene Modelers," presented at the Genome Sequencing and Biology Meeting, May 2002.

Larimer, F. W., L. Hauser, M. L. Land, D. Hyatt, M. B. Shah, S. Stilwagen, P. Predki, D. Arp, A. Hooper, S. Chisholm, G. Rocap, B. Palenik, J. Waterbury, R. Atlas, J. Meeks, C. Harwood, R. Tabita, P. Chain, and J. Lamerdin, "Annotation of Microbial Genomes Relevant to DOE's Carbon Management and Sequestration Program," presented at the Ninth DOE Contractor and Grantee Workshop, Oakland, California, January 27-31, 2002.

Larimer, F. W., L. Hauser, M. L. Land, D. Hyatt, M. B. Shah, P. F. LoCascio, E. C. Uberbacher, and I. Vokler, "Annotation of Draft Microbial Genomes," presented at the Ninth DOE Contractor and Grantee Workshop, Oakland, California, January 27-31, 2002.

Leuze, M. R. and B. H. Jones, "Comparative methods for identification of genomic regulatory regions," presented at the C. Warren Neel Conference: The New Frontiers of Statistical Data Mining, Knowledge Discovery, and E-Business, Knoxville, Tennessee, June 25, 2002 (Invited).

Liu, Y., "Genetic Dissection of the Roles of the Telomerase/Vault Associated Proteins in vivo," presented at The University of Tennessee's Biological, Cellular, and Molecular Biology Retreat, Fall Creek Falls State Park, Pikeville, Tennessee, May 10-11, 2002 (Invited).

Liu, Y., "Genetic Dissection of the Roles of Two Vault Associated Proteins, in Telomerase Function, in vivo," presented at the First International Meeting of the International Vault Research Group, Amsterdam, The Netherlands, May 16-17, 2002 (Invited).

LoCascio, P. F., D. Hyatt, F. W. Larimer, M. B. Shah, I. Vokler, and E. C. Uberbacher, "Beyond Terascale Biological Computing: GIST and Genomes to Life," presented at the Ninth DOE Contractor and Grantee Workshop, Oakland, California, January 27-31, 2002.

LoCascio, P. F., N. Doggett, E. Baker, D. Hyatt, M. Shah, D. D. Schmoyer, F. W. Larimer, J. R. Snoddy, and E. C. Uberbacher, "U.S. Department of Energy National Laboratories Collaborative High Throughput Genome Analysis Framework," presented at the Genome Sequencing and Biology Meeting, May 2002.

LoCascio, P. F., E. Baker, D. Hyatt, M. Shah, D. D. Schmoyer, M. L. Land, F. W. Larimer, J. R. Snoddy, and E. C. Uberbacher, "An Ontological Framework for Terascale Biological Computing," presented at the Genome Sequencing and Biology Meeting, May 2002.

McGinn, C. W., "Assessing Health Risks of Upstream and Downstream Wastes," presented to the Petroleum Environmental Research Forum Quarterly Meeting, San Ramon, California, February 2002.

McGinn, C. W., "Risk and Regulatory Analysis Overview," presented to U.S. Public Health Officers from the Division of Environmental Health, Indian Health Service, Department of Health and Human Services, Oak Ridge National Laboratory, Oak Ridge, Tennessee, March 12-13, 2002.

McGinn, C. W., "Cultural Impact Evaluation: Quality of Life," presented to U.S. Public Health Officers from the Division of Environmental Health, Indian Health Service, Department of Health and Human Services, Oak Ridge National Laboratory, Oak Ridge, Tennessee, March 12-13, 2002.

Michaud, E. J., "Genome-Wide, Gene-Driven Chemical Mutagenesis: The ORNL Cryopreserved Mutant Mouse Bank," presented at the 2002 ORNL LDRD Proram Review and Meeting on Implementation of the New LDRD Reporting Requirements, Oak Ridge National Laboratory, Oak Ridge, Tennessee, May 16, 2002 (Invited).

Michaud, E. J., "Genome-wide, Gene-driven Chemical Mutagenesis: The ORNL Cyropreserved Mutant Mouse Bank," presented at the Workshop on the ENU Mutagenesis: Planning for Saturation, Westfield's Marriott Conference Center, Chantilly, Virginia, July 25-28, 2002 (Invited).

Miller, D. R. (presenter), E. M. Rinchik, K. Goss, D. K. Johnson, J. Snoddy, E. Baker, M. Ferkin, K. Hamre, D. Matthews, G. Mittleman, M. Jablonski, R. Williams, D. Goldowitz, and the Tennessee Mouse Genome Consortium, "Mutagenesis and Phenotyping for Abnormalities of Behavior and the Central Nervous System by the Tennessee Mouse Genome Consortium," presented at the Mouse Initiative IV Workshop at the Jackson Laboratory, Bar Harbor, Maine, August 3, 2002. (Invited).

Olman, V. N., D. Xu, and Y. Xu (presenter), "Identification of regulatory binding sites using minimum spanning trees," presented at the C. Warren Neel Conference: The New Frontiers of Statistical Data Mining, Knowledge Discovery, and E-Business, Knoxville, Tennessee, June 25, 2002 (Invited).

Passian, A., G. Muralidharan, A. Mehta, T. L. Ferrell, and T. G. Thundat, "Manipulation of the Microcantilever Oscillations," presented at the Scanning Probe Microscopy Sensors and Nanostructures Conference, Las Vegas, Nevada, May 26-29, 2002 (poster session).

Passian, A., A. Wig, T. L. Ferrell, and T. G. Thundat, "Knudsen Forces on Microcantilevers," presented at the Scanning Probe Microscopy Sensors and Nanostructures Conference, Las Vegas, Nevada, May 28, 2002.

Passovets, S., M. B. Shah, L. Wang, D. Xu, and Y. Xu, "A Computational Pipeline for Genome-Scale Analysis of Protein Structures and Functions," presented at the Ninth DOE Contractor and Grantee Workshop, Oakland, California, January 27-31, 2002.

Rinchik, E. M., "Mouse Models and Susceptibility," presented at the DOE Briefing on Bioterrorism Defense Capabilities, Washington, D.C., February 27, 2002 (Invited).

Rinchik, E. M., D. A. Carpenter, Y. You, P. R. Hunsicker, D. R. Miller, and D. K. Johnson, "Functional Annotation of Mammalian DNA Sequence by Large-Scale Phenotype-Driver Recovery of Mouse Mutagens," presented at the 32nd Annual Meeting of the Environmental Mutagen Society, San Diego, California, March 16-21, 2002.

Rinchik, E. M., "Phenotype- and Gene-Driven Chemical Mutagenesis of the Mouse Germline," presented at the Department of Pathology, Yale University School of Medicine, April 23, 2002 (Invited).

Rinchik, E. M., "Phenotype-Driven Mutagenesis at the Oak Ridge National Laboraotry: Screens for Developmental, Neurobehavioral, and Imprinting Defects," presented at the Southeast Regional Meeting of the Socity for Developmental Biology, Gatlinburg, Tennessee, May 29-31, 2002.

Rinchik, E. M., "The Role of the Mouse Genetics and Genomics Program in ORNL's Complex Biological Systems Initiative," presented at the Complex Biology Systems Initiative Review, Oak Ridge National Laboratory, August 1, 2002 (Invited).

Rinchik, E. M. "There are at least two ways of studying genome and cellular responses to exposures," "Creating the CMMB," "CMMB Progress," and "Two ORNL research areas potentially relevant to host-pathogen studies," presented at the Chlamydia and Francisella Workshops, Santa Fe and Los Alamos, New Mexico, October 23-25, 2002. (Invited)

Shah, M. B., D. Hyatt, F. W. Larimer, P. F. LoCascio, I. Vokler, and E. C. Uberbacher, "The ORNL Genome Analysis Toolkit, Pipeline, and DAS Server," presented at the Ninth DOE Contractor and Grantee Workshop, Oakland, California, January 27-31, 2002.

Stewart, R. N., "Spatial Analysis and Decision Analysis (SADA)," presented to U.S. Public Health Officers from the Division of Environmental Health, Indian Health Service, Department of Health and Human Services, Oak Ridge National Laboratory, Oak Ridge, Tennessee, March 12-13, 2002.

Thundat, T. G., "Micromechanical Sensors," presented at the Department of Electrical Engineering Colloquium, Arizona State University, Tempe, Arizona, February 15, 2002 (Invited).

Thundat, T. G., "Micromechanical Sensors," presented at the Metals and Ceramics Division Seminar Series, Oak Ridge National Laboratory, Oak Ridge, Tennessee, February 28, 2002 (Invited).

Thundat, T. G., "Microcantilever Biosensors," presented at the 2002 Materials Research Society Spring Meeting, San Francisco, California, April 1-5, 2002.

Thundat, T. G., "Detection of Terrorist Threats Using Macrocantilever Platform," presented at the Scanning Probe Microscopy Sensors and Nanostructures Conference, Las Vegas, Nevada, May 28, 2002 (Invited).

Thundat, T. G., "Molecular Recognition Using Micromechanical Sensors," presented to State University of New York Physics Department, November 15, 2002 (invited).

Thundat, T. G., "Detection of terrorist threats using microcantilever platform," presented at Lawrence Livermore National Laboratory, Livermore, California, December 7, 2002 (invited).

Thundat, T. G., R. J. Warmack, P. G. Datskos, "Low-Power Capacitive Sensor Arrays," presented at DARPA/MTO Micro Gas Analyzers Meeting, Monterey, California, December 16, 2002 (invited).

Uberbacher, E. C., F. W. Larimer, R. L. Hettich, G. B. Hurst, M. V. Buchanan, D. Xu, and Y. Xu, "A Pilot Project for a Protein Complex Factory," presented at the Ninth DOE Contractor and Grantee Workshop, Oakland, California, January 27-31, 2002.

Wang, Y., "Genetic and Biochemical Characterization of Cul1 and Cdc14 in Cell Cycle Regulation," presented at the University of Tennessee's Biological, Cellular, and Molecular Biology Retreat, Fall Creek Falls State Park, Pikeville, Tennessee, May 10-11, 2002 (Invited).

Watson, A. P. and R. H. Ross, "Hazard Assessment for DOD: Past, Present, and Future," presented at the Life Sciences Division Brown-Bag Seminar, Oak Ridge National Laboratory, Oak Ridge, Tennessee, March 12, 2002.

Wig, A., A. Passian, X. Zhu, M. George, T. L. Ferrell, and T. G. Thundat, "Coatingless Chemical Detection Using Optical Excitation of Surface States on Microcantilevers," presented at the Scanning Probe Microscopy Sensors and Nanostructures Conference, Las Vegas, Nevada, May 26-29, 2002 (poster session).

Xu, D., D. Kim, C. Secrest, V. N. Olman, and Y. Xu, "Protein Structure Predictions by PROSPECT," presented at the Ninth DOE Contractor and Grantee Workshop, Oakland, California, January 27-31, 2002 (Invited).

Xu, D., "Computational Studies of Biological Pathways," presented at Ceres, Inc., California, May 31, 2002 (Invited).

Xu, Y., V. N. Olman, and D. Xu, "Minimum Spanning Trees for Gene Expression Data Clustering," presented at the Twelfth International Conference on Genome Informatics (GIW 2001), Tokyo, Japan, December 17, 2001 (Invited).

Xu, Y., D. Xu, D. Kim, and O. H. Crawford, "Protein Structure Determination Through Combining Protein Threading and Sparse NMR Data," presented at the Ninth DOE Contractor and Grantee Workshop, Oakland, California, January 27-31, 2002.

Xu, Y., D. Xu, V. N. Olman, and L. Wang, "EXCAVATOR: Gene Expression Data Analysis Using Minimum Spanning Trees," presented at the Ninth DOE Contractor and Grantee Workshop, Oakland, California, January 27-31, 2002.

Xu, Y., "Genome-scale protein structure predictions using PROSPECT," presented at the Southeast Structural Genomics Center, University of George at Athens, June 17, 2002 (Invited).

Xu, Y., "Computational Studies of Structure, Function, and Pathway: Bridging the Gap between High-Throughput Data and Traditional Biology," presented at Genentech, Inc., California, August 13, 2002.

Xu, Y., "An Efficient Branch-and-Bound Algorithm for the Assignment of Protein Backbone NMR Peaks," presented at the IEEE Computer Society Bioinformatics Conference (CSB2002), Stanford University, California, August 15, 2002.

Xu, Y., "High-throughput protein structure prediction and modeling using PROSPECT," presented at the Department of Biochemistry and Molecular Biology, Michigan State University, October 17, 2002. (Invited)

Xu, Y., "Protein Structure Predictions using PROSPECT," presented at the Biochemistry Department, Mississippi State University, September 16, 2002. (Invited)

Xu, Y., "Combinatorial optimization algorithms for regulatory binding site identification," presented at the Computer Science Department, Sandia National Laboratory, August 19, 2002. (Invited)

Xu, Y., "A combinatorial optimization framework for biological data clustering," presented at the SIAM Conference on Discrete Mathematics, August 12, 2002. (Invited)

You, Y., "Analysis of Embryonic Lethal Mutations," presented to Virginia Polytechnic Institute and State University Faculty, Oak Ridge National Laboratory, Oak Ridge, Tennessee, February 15, 2002.

You, Y., H. H.-J. Chao, S. J. Mentzer, W. S.-H. Chick, B. L. Alspaugh, D. A. Carpenter, G. D. Shaw, D. Goldowitz, and E. M. Rinchik, "Characterization of Recessive Lethal Mutations Derived from ENU Mutagenesis Projects at ORNL," presented at the Southeast Regional Meeting of the Society for Developmental Biology, Gatlinburg, Tennessee, May 29-31, 2002 (poster session).

Zhou, J., F. W. Larimer, J. M. Tiedje, K. H. Nealson, R. Smith, T. Palzkill, B. O. Palsson, C. Giometti, D. Xu, M. Lipton, A. S. Beliaev, D. K. Thompson, M. W. Fields, J. R. Cole, and J. Klappenbach, "Integrated Analysis of Protein Complexes and Regulatory Networks Involved in Anaerobic Energy Metabolism and Shewanella oneidensis MR-1," presented at the Ninth DOE Contractor and Grantee Workshop, Oakland, California, January 27-31, 2002.

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