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American
Society for Mass Spectrometry 2009 - Philadelphia, Pennsylvania
Online Sample Manipulation and Preparation within Liquid Extraction Based Surface Sampling Probes 1D Spatial Chromatographic Readout of Complex Samples with Liquid Microjunction Surface Sampling Probe/Electrospray Ionization Mass Spectrometry Systems Comparison of Positive and Negative Ionization-Based Electrospray Methods for Analyzing Cellodextrins in Biomass Samples Proteomics of Small Proteins from Plant Tissues Clustering by Homology Increases Confidence in Protein Identifications in Populus Proteomics Addressing Protein Degeneracy Using MS-based Proteomics and a Model Human Gut Microbiota of 12 Bacterial Species Established in Gnotobiotic Mice Comparison of Direct and Indirect Extraction Methods for Deep Metaproteomics of the Gut Microbiota Evaluation of the Effect of Varying Cellular Lysis and Biomass Quantities on the Fractionation and Proteome Measurement of Microbial Isolates Enhanced Protein Extraction for Microbial (Meta)Proteomics of Defined Laboratory and Environmental Samples Systematic Comparison of Label-free, Metabolic Labeling, and Chemical Labeling Approaches for Quantitative Proteomics on LTQ-Orbitrap-Velos
Identification of Isomeric Phase II Drug Metabolites From Mouse Thin Tissue Sections using Liquid-Extraction Based Surface Sampling Mass Spectrometry Matthew J. Walworth; Joseph J. Stankovich; Mariam S. ElNaggar; Chuck Witkowski; Jeremy L. Norris; Gary J. Van Berkel Thin Layer Chromatography and Mass Spectrometry Coupled using Proximal Probe Thermal Desorption with Electrospray or Atmospheric Pressure Chemical Ionization Evaluating the Ethanol Tolerance of Cellulose-Digesting Microbes using UPLC/MS Determining the Spectrum to Peptide Assignment Ratio of MS Analysis of Microbial Communities for Increased Proteomic Coverage Integrating Metagenomics and Metaproteomics Provides Insight Into The Molecular Activities and Biosignature(s) Of The Human Gut Microbiota In Crohn’s Disease Shotgun Proteomics of the Lactic Acid Bacterium Streptococcus thermophilus and its Phage 2972 Over a Time Course of Infection Optimization of Experimental Protocols for Cellular Lysis and Proteogenomic Characterization of Soil Microbial Species Elucidating The Parasitic/Symbiotic Association Between The Archaea Ignicoccus Hospitalis and Nanoarchaeum Equitans Via Differential Proteomics Proteomics of Leaf Tissues From Populus Using ANOVA on Spectral Counts Improves Multidimensional Label-free Quantitative Proteomic Analysis
Deep Proteome Characterization and Comparison of Populus Species under Wild-type vs. Tensional Stress Environmental Conditions Quantifying the Cellulosome Protein Machine in Whole-Cell Lysate from Clostridium thermocellum as a Function of Cellulosic Substrate
Direct Analysis of RP HPTLC Separated Tryptic Protein Digests using a Liquid Microjunction Surface Sampling Probe/ESI-MS System Preventing Electrolysis of Analytes in Electrospray Ionization Mass Spectrometry using a Redox Polymer Coated Emitter Instrumentation for Atmospheric Pressure, Nanoscale Chemical Imaging via Tip-Enhanced, Near-Field Desorption/Ionization Mass Spectrometry Formulation of a MySQL Database and Query Toolset to Extract Complex Metabolic Information from Natural Microbial Consortia Mapping Protein Dynamics with an Electrochemistry-Based Pipeline Optimized for the Kinetics of the Indirect Oxidation Pathway Shotgun Proteomic Analysis of a Model 7-Member Human Gut Microbiota created in Gnotobiotic Mice High Mass Accuracy Applied to de novo Algorithms for Applications to Rapidly Evolving Natural Viral-Microbial Communities Extending the Dynamic Range of Proteome Measurement in a Natural Microbial Community with IEF Protein Fractionation and Multidimensional LC-MS/MS An Integrated Bottom-up and Top-down Characterization of Metalloproteins and Protein Molecular Forms in the Extracellular Fraction of Extremophilic Microbial Communities Investigating the Functional Activities and Cellular Processes of the Human Gut Microbiome by LC/LC-MS/MS Database-Searching Approach for Shotgun Proteomics Bruce A. Tomkins, Gary J. Van Berkel, Timothy J. Tschaplinski, Nancy L. Engle Characterizing Protein Post-Translational Modifications in a Cellulose-Degrading Bacteria Using a Combined CAD and ETD Approach
<An
Integrated Computational and Experimental Approach to Characterize the
Extracellular Proteome From a Natural Extremophilic Microbial Community
<Comparison
of Drug Distribution Images from Thin Tissue Sections Obtained Using
Desorption Electrospray Ionization Tandem Mass Spectrometry and Whole-Body
Autoradiography <Differentiation
of Specific and Non-Specific Microbial Protein Interactions by Isotopic
Labeling and Mass Spectrometry <Enhanced
Performance of a Liquid Microjunction Surface Sampling Probe using ESI
and APCI <Experimental
and Informatic Aspects of Electrochemical Oxidation as a Surface Mapping
Probe of Higher Order Protein Structure <Factors
Affecting Signal Levels in HPTLC/DESI-MS of Dipeptides and Tryptic Peptides
<HPTLC/DESI-MS
Imaging of Tryptic Protein Digests Separated in Two Dimensions <Identification
of Protein Complexes in Rhodopseudomonas palustris <Metaproteomics
of Subsurface Microbial Communities at Contaminated DOE Sites <Optimized
LC-MS/MS System Performance for High Throughput Analysis of Affinity
Isolated Protein Complexes <Probing
Native Structures Of Homologous Large Proteins With Differential Covalent
Labeling and Mass Spectrometry Characterization <Proteomic
Characterization of the Gut Microbiomes of Gnotobiotic Mice and Colonization
with Single of Dual Bacterial Strains <Quantitative
Mass Spectrometric Characterization of Substrate-Dependent Changes in
the Cellulosome of Clostridium thermocellum Posters
Presented at the Effect
of Spray Plume Characteristics on Desorption and Ionization in DESI Surface
Analysis and Chemical Imaging with DESI: Technology-Related Challenges
and Solutions Performance
Study of an Extended Length Particle Discriminator Interface for Desorption
Electrospray Ionization Mass
Spectrometric Identification of Protein Complexes in Rhodopseudomonas
palustris Evaluation
of Periplasmic Proteome Enrichment by Differential Isotope Labeling
and Mass Spectrometry LC-MS
Based Detection of Molecular Genetic Modifications in Bacteria
Mining
Shotgun Proteomic Data for the Role of Post-Translational Modifications
in the Adaptive Response of Shewanella oneidensis to Chromate Exposure
Proteogenomics
Reveals Key Insight Into The Microbial Activities Of Enhanced Biological
Phosphorus Removal In Activated Sludge Mass
Spectrometry-Based Proteogenomic Characterization of the Human Gut Microflora
from Crohn’s Patients Environmental
Proteomics of SAR11 and OM43 Clade Proteobacteria in Oregon Coastal
Seawater Investigation
of Protein Sequence Variants in a Natural Microbial Community by Top-Down
Proteomics Development
of Quantitative Community Proteomics Using Metabolic Stable Isotope
Labeling to Characterize a Natural Microbial Community from Acid Mine
Drainage PIGT:
Proteomics Inferred Genotyping in Natural Environments Posters
Presented at the ProRata:
a Software Package with Improved Point and Interval Estimation of Protein
Abundance Ratio for Quantitative Shotgun Proteomics Calculation
of Key Characteristics for Ion Ensembles in Quadrupole Ion Traps Without
Utilizing Trajectory Simulations Characterization
of Aromatic Compound Degradation Pathways in Rhodopseudomonas palustris
with Stable Isotope Labeling Quantitative Shotgun Proteomics and Microarray Differentiation
of Specific and Non-Specific Protein Interactions in Bacteria by Isotopic
Labeling and Mass Spectrometry Examining
Protein Conformations in Mixtures by Hydroxyl Radical Surface Mapping
with High Resolution Mass Spectrometry Experimental
Approach For Large-Scale Proteome Measurements From Small Amounts (low
mg) Of Microbial Cultures Integrated
Top-Down and Bottom-Up Protein Identification Software - PTMSearchPlus
Label
Free Quantitation, with Biological and Technical Replicates, of a Rhodopseudomonas
palustris Strain, which Produces Copious Quantities of Hydrogen Gas The
Dynamic Range Challenges for Proteomics in Microbial Communities Topologically
Informative Residues of Large Proteins Can Be Marked By Oxidation and
Mapped by Mass Spectrometry Using
the Inherent Electrochemistry in a Microfabricated Nanospray Emitter
System for Analytical Advantage
The
Electrochemistry of Electrospray: Tales of Roads Less Traveled
Posters
and Presentations Presented at the TLC
and APCI-MS Coupled Using a Surface Sampling Heated Nebulizer
Probe Moment
Theory of Ion Motion in Electrodynamic Quadrupole Ion Traps Affinity
Isolation and Mass Spectometric Analysis of Protein Complexes from Rhodopseudomonas
palustris Automated
Surface Sampling Electrospray Mass Spectrometry Characterization
of Sources of Variability in LC-MS/MS Analysis of Protein Complexes Efficient
and Specific Trypsin Digestion of Microgram and Nanogram Amounts
of Proteins in Organic Solvents Quantitative
TLC/MS of Caffeine Using Surface Sampling Electrospray Ionization
Mass Spectrometry Desorption
Electrospray Ionization for the Analysis of Analytes on Surfaces Top-down
MS Analysis of Microbial Growth States from Rhodopseudomonas
palustris by Off-Line FPLC Fractionation and Capillary HPLC
Interfaced to FTICRMS Proteomic
Verification of Signal Peptide Prediction Algorithms in Rhodopseudomonas
palustris Novel
Algorithms for the Quantification Confidence in Quantitative Proteomics
with Stable Isotope Labeling - Presentation Technology
Developments for Characterizing the complex Protein Datasets of
Microbial Communities Proteome
Characterization of Chromium-shocked and Chromium-adapted Shewanella
oneidensis Proteomics
Of The Microbial Community In An Acid Mine Drainage Biofilm Posters
presented at the 52nd Annual ASMS Conference on Spray Ionization Interfaces for Surface Sampling with Mass
Spectrometry A New Tandem-in-Time and –in-Space Mass Spectrometer for High-Throughput
MS/MS Investigation of Reserpine Oxidation Using On-Line Electrochemistry/Electrospray
Mass Spectrometry Rapid Mass Spectral
Acquisition and Statistical Analysis for Determination of Scent
Discriminators Study and Application
of a Porous Flow-Through Electrode Electrospray Emitter Enhanced Characterization of the
Membrane Proteome from the Anoxygenic Phototrophic Bacterium Rhodopseudomonas
palustris under all Major Metabolic States Integration of HPLC-FTICR MS
and HPLC-QIT MS2 to Achieve Enhanced Proteome Characterization Protein Surface Mapping by Mass
Spectrometry to Monitor pH-Dependent Structural Transitions in
Beta-lactoglobulin A* Characterizing
Protein Isoforms and PTMs in Microbial Systems by Top-Down Measurements
with Capillary HPLC Interfaced to FTICR-MS Characterization of 70S Ribosome
from Rhodopseudomonas palustris using an Integrated “Top-Down
and “Bottom-Up” Mass Spectrometric Approach Analysis of Protein
Complexes from Rhodopseudomonas palustris by Mass Spectrometry 2003
Presentations from the 51st ASMS Conference in Tutorial Lecture by Dr. Gary J. Van Berkel Atmospheric Pressure Ionization Techniques Mass Spectrometric Analysis of
Protein Complexes from Rhodopseudomonas palustris Affinity Purification of Crosslinked Peptides, by Michael B. Strader Surface Sampling with Electrospray Mass Spectrometry, by Michael J. Ford Proteome
Analysis of the Anoxygenic Photobacterium Rhodopseudomonas
palustris Proteome
Profiling of Shewanella oneidensis MR-1 fur, etrA, and
fur/etrA Mutants Computational
and Experimental Simulations for Mass Spectrometry based identification
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Provided by Oak Ridge National Laboratory's Chemical Sciences Division Rev: June 2009
Biemann Medal Lecture 
